Accounting Software for Shopify
NeonPanel is accounting software for Shopify that combines landed cost, multi-location stock, processor fees, and financial reporting in one audit-ready ledger. Built as Shopify accounting software, NeonPanel automates order accounting, inventory costing, and batch-level COGS while keeping your financial records synchronized with QuickBooks or Xero.
- Accounting
- Inventory
- Forecasting
- AI access
Trusted by 200+ ecommerce teams
NeonPanel Shopify accounting: what you get
Shopify data flows into NeonPanel as structured settlements and orders. Inventory value stays aligned across warehouses and currencies. Post to QuickBooks or Xero; layer Automatic COGS and inventory management when you need batch depth. The accounting hub explains the full multi-channel stack.
Inventory and cost tracking in one pass
NeonPanel connects Shopify to the same ledger as Amazon, TikTok Shop, and other channels you operate.
See on-hand, in-transit, and reserved inventory across 3PLs and owned warehouses without maintaining a parallel workbook.
- Multi-channel sync — Shopify sales sit on the same inventory and accounting layer as other marketplaces.
- Availability you can trust — Channel stock reflects physical counts and reservations across locations.
Reporting that matches the bank and the GL
Automate fee classification, tax lines, and payout timing so leadership reads one settlement-true story.
Shopify Accounting Automation
Orders, payouts, taxes, and payment processor fees flow into one accounting workflow through a Shopify accounting integration, eliminating manual exports and spreadsheet imports.
- Automatic journal creation — Sales, refunds, taxes, and payouts are converted into accounting entries automatically.
- Processor fee mapping — Shopify Payments, Stripe, and PayPal fees post to the correct expense accounts.
- Continuous financial sync — Journals, fees, and payouts stay synchronized with every Shopify transaction, helping finance teams close the books faster.
True profit visibility
Built for growing Shopify brands, NeonPanel combines operational and financial data into one source of truth for accounting for Shopify stores.
- Landed cost accuracy — Freight, duties, and service invoices roll into landed cost so order margin reflects procurement reality.
- Payment reconciliation — Processor fees, taxes, and payouts remain linked to every order.
- Direct sync — Validated journals push to Xero or QuickBooks on a continuous schedule finance can rely on.
- Financial visibility — Profitability updates automatically as inventory costs and financial records change.
Shopify-specific accounting features
Order sync
Orders carry revenue recognition, tax, and shipping lines as finance expects.
Payment fee tracking
Shopify Payments, PayPal, Stripe, and similar processors land in distinct fee accounts.
Refund handling
Refunds post reversing entries with the same traceability as the original sale.
Multi-location tracking
Fulfilment source and 3PL nodes feed cost allocation instead of a single blended warehouse rate.
Tax compliance
Sales tax captured by jurisdiction with supporting lines for review.
Frequently Asked Questions
NeonPanel classifies sales tax, separates fees from net revenue, and keeps payout timing visible so profit is settlement-true, not dashboard-estimated.
Automated capture removes repetitive entry, preserves an audit trail, and syncs structured journals to QuickBooks or Xero on a schedule your controller sets.
Direct integration keeps Shopify orders, processor fees, and payouts aligned with bank deposits and the GL instead of three divergent tabs.
Yes. NeonPanel is multi-channel by design: Shopify, Amazon, TikTok Shop, and more share one ledger.
Sales reduce on-hand units, move inventory asset at landed cost, and can post COGS on sale through Automatic COGS, keeping the balance sheet current.
Order volume outruns spreadsheet maintenance. NeonPanel scales throughput, keeps categorisation consistent, and avoids manual copy-paste between systems.
Batch-level landed cost follows receipts through consumption so margins reflect actual procurement, not a static average cost sheet.